Charusanti, Pep: search on Z-Library

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1

Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models

Lewis, Nathan E, Hixson, Kim K, Conrad, Tom M, Lerman, Joshua A, Charusanti, Pep, Polpitiya, Ashoka D, Adkins, Joshua N, Schramm, Gunnar, Purvine, Samuel O, Lopez-Ferrer, Daniel, Weitz, Karl K, Eils,

Journal:

Molecular Systems Biology

Year:

2010

Language:

english

File:

PDF, 1.02 MB

english, 2010

2

Systems biology and biotechnology of Streptomyces species for the production of secondary metabolites

Hwang, Kyu-Sang, Kim, Hyun Uk, Charusanti, Pep, Palsson, Bernhard Ø., Lee, Sang Yup

Journal:

Biotechnology Advances

Year:

2014

Language:

english

File:

PDF, 1.29 MB

english, 2014

3

Capsule deletion via a λ-Red knockout system perturbs biofilm formation and fimbriae expression inKlebsiella pneumoniaeMGH 78578

Huang, Tzu-Wen, Lam, Irene, Chang, Hwan-You, Tsai, Shih-Feng, Palsson, Bernhard O, Charusanti, Pep

Journal:

BMC Research Notes

Year:

2014

Language:

english

File:

PDF, 374 KB

english, 2014

4

Metabolic engineering of antibiotic factories: new tools for antibiotic production in actinomycetes

Weber, Tilmann, Charusanti, Pep, Musiol-Kroll, Ewa Maria, Jiang, Xinglin, Tong, Yaojun, Kim, Hyun Uk, Lee, Sang Yup

Journal:

Trends in Biotechnology

Year:

2015

Language:

english

File:

PDF, 1.13 MB

english, 2015

5

The aldehyde dehydrogenase, AldA, is essential for L-1,2-propanediol utilization in laboratory-evolved Escherichia coli

Aziz, Ramy K., Monk, Jonathan M., Andrews, Kathleen A., Nhan, Jenny, Khaw, Valerie L., Wong, Hesper, Palsson, Bernhard O., Charusanti, Pep

Journal:

Microbiological Research

Year:

2016

Language:

english

File:

PDF, 674 KB

english, 2016

6

Reconciling a Salmonella enterica metabolic model with experimental data confirms that overexpression of the glyoxylate shunt can rescue a lethal ppc deletion mutant

Fong, Nicole L., Lerman, Joshua A., Lam, Irene, Palsson, Bernhard O., Charusanti, Pep

Journal:

FEMS Microbiology Letters

Year:

2013

Language:

english

File:

PDF, 134 KB

english, 2013

7

Systems biology definition of the core proteome of metabolism and expression is consistent with high-throughput data

Yang, Laurence, Tan, Justin, O’Brien, Edward J., Monk, Jonathan M., Kim, Donghyuk, Li, Howard J., Charusanti, Pep, Ebrahim, Ali, Lloyd, Colton J., Yurkovich, James T., Du, Bin, Dräger, Andreas, Thomas

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 1.14 MB

english, 2015

8

An experimentally-supported genome-scale metabolic network reconstruction forYersinia pestisCO92

Pep Charusanti, Sadhana Chauhan, Kathleen McAteer, Joshua A Lerman, Daniel R Hyduke, Vladimir L Motin, Charles Ansong, Joshua N Adkins, Bernhard O Palsson

Journal:

BMC Systems Biology

Year:

2011

Language:

english

File:

PDF, 544 KB

english, 2011

9

A community effort towards a knowledge-base and mathematical model of the human pathogenSalmonellaTyphimurium LT2

Ines Thiele, Daniel R Hyduke, Benjamin Steeb, Guy Fankam, Douglas K Allen, Susanna Bazzani, Pep Charusanti, Feng-Chi Chen, Ronan MT Fleming, Chao A Hsiung, Sigrid CJ De Keersmaecker, Yu-Chieh Liao, Ka

Journal:

BMC Systems Biology

Year:

2011

Language:

english

File:

PDF, 881 KB

english, 2011

10

CRISPR-Cas9 Based Engineering of Actinomycetal Genomes

Tong, Yaojun, Charusanti, Pep, Zhang, Lixin, Weber, Tilmann, Lee, Sang Yup

Journal:

ACS Synthetic Biology

Year:

2015

Language:

english

File:

PDF, 1.27 MB

english, 2015

11

Genetic Basis of Growth Adaptation of Escherichia coli after Deletion of pgi, a Major Metabolic Gene

Charusanti, Pep, Conrad, Tom M., Knight, Eric M., Venkataraman, Karthik, Fong, Nicole L., Xie, Bin, Gao, Yuan, Palsson, Bernhard Ø., Casadesús, Josep

Journal:

Year:

2010

Language:

english

File:

PDF, 862 KB

english, 2010

12

Microbial regulatory and metabolic networks

Byung-Kwan Cho, Pep Charusanti, Markus J. Herrgård, Bernhard ∅. Palsson

Journal:

Current Opinion in Biotechnology

Year:

2007

Language:

english

File:

PDF, 128 KB

english, 2007

13

Multiple-omic data analysis ofKlebsiella pneumoniaeMGH 78578 reveals its transcriptional architecture and regulatory features

Seo, Joo-Hyun, Hong, Jay, Kim, Donghyuk, Cho, Byung-Kwan, Huang, Tzu-Wen, Tsai, Shih-Feng, Palsson, Bernhard O, Charusanti, Pep

Journal:

Year:

2012

Language:

english

File:

PDF, 549 KB

english, 2012

14

Understanding system dynamics of an adaptive enzyme network from globally profiled kinetic parameters

Chiang, Austin WT, Liu, Wei-Chung, Charusanti, Pep, Hwang, Ming-Jing

Journal:

BMC Systems Biology

Year:

2014

Language:

english

File:

PDF, 428 KB

english, 2014

15

Metabolic engineering with systems biology tools to optimize production of prokaryotic secondary metabolites

Kim, Hyun Uk, Charusanti, Pep, Lee, Sang Yup, Weber, Tilmann

Journal:

Natural Product Reports

Year:

2016

Language:

english

File:

PDF, 705 KB

english, 2016

16

Dissemination of antibiotic resistance genes from antibiotic producers to pathogens

Jiang, Xinglin, Ellabaan, Mostafa M. Hashim, Charusanti, Pep, Munck, Christian, Blin, Kai, Tong, Yaojun, Weber, Tilmann, Sommer, Morten O. A., Lee, Sang Yup

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 935 KB

english, 2017

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